Saccharomyces Genome Database
Tutorial and training materials by OpenHelix
|Learn to use Saccharomyces Genome Database (SGD), a collection of data and tools for genetic and proteomic analyses of the bakers' or budding yeast, Saccharomyces cerevisiae. As the first eukaryotic genome to be fully sequenced, Saccharomyces cerevisiae, has a unique history. Yeast is a widely used model organism for molecular biology, genetics and genomics analysis and this resource contains a tremendous amount of knowledge with extensive depth. Learn how to use this resource, so you too can effectively use the tools and mine the voluminous data available in this database.|
- to navigate the SGD site, locate Basic and Advanced Search options, and use the site map to access additional search tools
- to perform the two Basic SGD Quick and Text Search types and understand the displays
- to navigate the SGD Locus Page and access data from a variety of tools, tabs, and links
- to investigate many related resources associated with SGD
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Recent BioMed Central research articles citing this resource
Hou Cheng-Yu et al., Beyond cleaved small RNA targets: unraveling the complexity of plant RNA degradome data Plant genomics. BMC Genomics (2014) doi:10.1186/1471-2164-15-15
Hasin Naushaba et al., Global transcript and phenotypic analysis of yeast cells expressing Ssa1, Ssa2, Ssa3 or Ssa4 as sole source of cytosolic Hsp70-Ssa chaperone activity Eukaryote microbial genomics. BMC Genomics (2014) doi:10.1186/1471-2164-15-194
Nabeel-Shah Syed et al., Molecular evolution of NASP and conserved histone H3/H4 transport pathway Genome evolution and evolutionary systems biology. BMC Evolutionary Biology (2014) doi:10.1186/1471-2148-14-139
Huntley P Rachael et al., A method for increasing expressivity of Gene Ontology annotations using a compositional approach Knowledge-based analysis. BMC Bioinformatics (2014) doi:10.1186/1471-2105-15-155
Zhang Xiao-Fei et al., Detecting overlapping protein complexes based on a generative model with functional and topological properties Networks analysis. BMC Bioinformatics (2014) doi:10.1186/1471-2105-15-186
More about the resource:
SGD is a public resource that offers an amazing wealth of data and tools to advance biological and biomedical research. The unique position of Saccharomyces cerevisiae as a model eukaryotic genetic organism with a small, well-characterized genome enhances comparative genetic analysis of humans and other model organisms. The SGD Locus Page, the basic organizing unit of SGD, is a stepping point for viewing mutant phenotype, interaction, structure-function, and expression data. All of this information can be easily analyzed by utilizing the wide variety of tools and resources that SGD provides. The SGD project is located in the Department of Genetics at the School of Medicine, Stanford University.
The materials and slides offered can not be resold or used for profit purposes. Reproduction, distribution and/or use is strictly limited to instructional purposes only and can not be used for for monetary gain or wide distribution.
Copyright 2009, OpenHelix, LLC.