Rat Genome Database
Tutorial and training materials by OpenHelix
| Learn to use the Rat Genome Database (RGD), a collection of data, tools and resources on the model organism Rattus norvegicus. The rat is a well-characterized model for research on mammalian physiology and human disease. The addition of a characterized rat genome to the mouse and human sequence provides a rich resource for comparative genomics analysis. Any researcher using rat as the model organism for their research would benefit greatly from learning how to use the resources and tools available at the Rat Genome Database. Links to animal collections and husbandry, including colony management tools, are also available at RGD. | Advertisement:
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You'll learn:
- to perform effective searches and understand the gene, QTL and strain displays
- to perform advanced searches enabling multifaceted queries
- to access and use the RGD Disease Portals, alternative entry points to disease-specific rat, human and mouse data
- to use VCMap, SNPlotyper and other tools and resources associated with RGD
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Recent BioMed Central research articles citing this resourcevon Nickisch-Rosenegk Markus et al., Construction of an artificial cell membrane anchor using DARC as a fitting for artificial extracellular functionalities of eukaryotic cells. Journal of Nanobiotechnology (2012) doi:10.1186/1477-3155-10-1 Kitagawa Toshiro et al., RGD targeting of human ferritin iron-oxide nanoparticles enhances in vivo molecular MRI of experimental aortic aneurysms Abstracts of the 15th Annual SCMR Scientific Sessions: 2012 15th Annual SCMR Scientific Sessions. Journal of Cardiovascular Magnetic Resonance (2012) doi:10.1186/1532-429X-14-S1-M9 Tomiyama Tetsuro et al., Effect of introduction of chondroitin sulfate into polymer-peptide conjugate responding to intracellular signals. Nanoscale Research Letters (2011) doi:10.1186/1556-276X-6-532 Lederle Wiltrud et al., Failure of annexin-based apoptosis imaging in the assessment of antiangiogenic therapy effects. EJNMMI Research (2011) doi:10.1186/2191-219X-1-26 Ricks-Santi J Luisel et al., Association of Rad51 polymorphism with DNA repair in BRCA1 mutation carriers and sporadic breast cancer risk. BMC Cancer (2011) doi:10.1186/1471-2407-11-278 |
More about the resource:
RGD is a public resource that offers an amazing wealth of data and tools and resource links, including genes, QTL, strains, and links to associated rat models, phenotype, and strain resources such as the PhysGen Database, also housed at Medical College of Wisconsin. RGD Disease Portals collect and organize gene, QTL, and strain data associated with Cardiovascular Disease, Neurological Disease and Obesity/Metabolic Syndrome. Additional tools and resources provide access points to rat, human and mouse data for comparative genomics analysis and biomedical research.
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