Learn to use the Galaxy resource from the Galaxy Teams at various institutions. Galaxy is an excellent online genome analysis tool that combines the power of existing genome annotation databases with a simple web portal with a variety of tools and algorithms, to enable users to search remote resources, combine data from independent queries, prepare, manipulate and analyze the data using a large suite of analysis tools. A history is created for every analysis providing a record ensuring reproducibility of results. Galaxy also presents the opportunity to create and share workflows of analysis.
You will learn:
This tutorial is a part of the tutorial group Advanced Analysis and Queries. You might find the other tutorials in the group interesting:
BioMart: Management and querying of many types of biological data
UniProt: UniProt, Universal Protein Resource
DBTSS: Database of Transcriptional Start Sites
ENCODE Data at UCSC: ENCODE Data at UCSC
Algorithms and Analysis : This category contains various tools that may help perform analysis of different genomics data types. This may include sequence alignment, large-scale or complex queries, motif finding, or comparative assessments.
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Recent BioMed Central research articles citing this resource
Descrimes Marc et al., VING: a software for visualization of deep sequencing signals Bioinformatics. BMC Research Notes (2015) doi:10.1186/s13104-015-1404-5
Galeano Esteban et al., Large-scale transcriptional profiling of lignified tissues in Tectona grandis Genetics and crop biotechnology. BMC Plant Biology (2015) doi:10.1186/s12870-015-0599-x
Kelsey D. Angela et al., Impact of flanking chromosomal sequences on localization and silencing by the human non-coding RNA XIST. Genome Biology (2015) doi:10.1186/s13059-015-0774-2
Haider Syed et al., DAPPER: a data-mining resource for protein-protein interactions. BioData Mining (2015) doi:10.1186/s13040-015-0063-3
Bayam Efil et al., Genome-wide target analysis of NEUROD2 provides new insights into regulation of cortical projection neuron migration and differentiation Human and rodent genomics. BMC Genomics (2015) doi:10.1186/s12864-015-1882-9