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Analyze and visualize molecular interaction networks

Tutorial and training materials by OpenHelix

Learn to use BiologicalNetworks, a software platform created to analyze and visualize molecular interaction networks, metabolic and signaling pathways with experimental data, genomic sequences, 3D structure information, ontologies and taxonomies. The functionality built into this tool allows users to analyze complex molecular interactions at the systems level. In addition, BiologicalNetworks also has a built in tool for pathway analysis of microarray expression data. For researchers who investigate molecular interactions, this resource allows you to combine curated pathways with your own experimental data to create biological pathways tailored to your research needs.

You'll learn:

  • to use BiologicalNetworks’ Graphical User Interface
  • how to explore KEGG curated pathways
  • how to search Biological Networks to create curated pathways
  • how to add experimental data to create your own biological pathway diagrams
  • how to load and visualize microarray expression data

More about the resource:

BiologicalNetworks is developed on top of PathSys, which is a scalable warehousing database system that houses data from multiple data sources. These resources were created and are maintained at the San Diego SuperComputer Center, at the University of California San Diego and the Keck Graduate Institute.


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The materials and slides offered can not be resold or used for profit purposes. Reproduction, distribution and/or use is strictly limited to instructional purposes only and can not be used for for monetary gain or wide distribution.
Copyright 2009, OpenHelix, LLC.

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