Learn to use The Consortium for Functional Glycomics Gateway. The CFG is a large international research initiative that works with and serves the scientific community. They provide a networking forum and glycomics resources which enable Participating Investigators to reveal functions of glycans and glycan-binding proteins (GBPs) that impact human health and disease. The CFG offers resources to the community free of charge, including glycan array screening services, a reagent bank, and access to a large glycomics database and data analysis tools. The extensive data sets that have resulted from the use of CFG resources are publicly available through the website, and include results from glycan array screening, glycogene microarray screening, mouse phenotyping, and glycan profiling experiments. This tutorial will explore the Gateway features and tools.

You will learn:

  • features of the Consortium for Functional Glycomics organization and goals
  • about the "third alphabet" glycomics code that conveys crucial information in cells
  • to explore Data and Molecule Pages provided by the CFG researchers
  • to access Paradigm Pages with excellent summary knowledge about exemplary glycan-binding proteins (GBPs)
  • to find additional supporting resources provided by the consortium
TUTORIAL RELATED CONTENT

TUTORIALS

This tutorial is a part of the tutorial group Expression resources. You might find the other tutorials in the group interesting:

CleanEx: A Database of Heterogeneous Gene Expression Data Based on A Consistent Gene Nomenclature

Allen Mouse Brain Atlas: Mapped gene expression data in mouse brain

miRBase: microRNA sequences, targets and gene nomenclature

DBTSS: Database of Transcriptional Start Sites

Alternative Splicing and Transcript Diversity (ASTD) database: A bioinformatics resource for alternative splice events and transcripts for human, mouse, and rat

GENSAT: Provides an extensive amount of high quality images of gene expression in the central nervous system of the mouse.

Gene Expression Omnibus (GEO): A gene expression/molecular abundance repository and a curated, online resource for gene expression data

ArrayExpress: A public repository for microarray gene expression data at the EBI

CATEGORIES

Expression : This category may contain various expression data collections, annotation tools, or repositories of expression data.

Proteins : Tools that are primarily used in the storage, retrieval, or exploration of amino acid based data. Some tools may also involve nucleotide sequence information.

BLOG POSTS

Video tip of the week: Functional Glycomics Gateway: Usually we have a 5 minute introduction to some resource--but this week's tip of the week is MUCH more than that. We are officially announcing our newest tutorial suite on the Functional Glycomics Gate...

BIOMED CENTRAL

Recent BioMed Central research articles citing this resource

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Pountos Ippokratis et al., The role of peptides in bone healing and regeneration: a systematic review. BMC Medicine (2016) doi:10.1186/s12916-016-0646-y

Hosseini Ali et al., Morphometric analysis of inflammation in bronchial biopsies following exposure to inhaled diesel exhaust and allergen challenge in atopic subjects. Particle and Fibre Toxicology (2016) doi:10.1186/s12989-016-0114-z

Polat Meripet et al., A new genotype of bovine leukemia virus in South America identified by NGS-based whole genome sequencing and molecular evolutionary genetic analysis. Retrovirology (2016) doi:10.1186/s12977-016-0239-z