OpenHelix tutorials in category Algorithms and Analysis
| Name | Description | Resources | |
|---|---|---|---|
 | BLAST | Basic Local Alignment and Search Tool | NCBI BLAST |
| Consensus | A pattern and motif recognition program | Consensus |
| DCODE | DCODE.org Comparative Genomics Developments, a collection of powerful comparative genomics tools | Dcode.org anthology of comparative genomic tools |
| FASTA | FASTA sequence algorithm | FASTA |
 | Galaxy | Analysis tools for researchers | Galaxy |
| Gene Expression Omnibus (GEO) | A gene expression/molecular abundance repository and a curated, online resource for gene expression data | Gene Expression Omnibus (GEO) |
| Gibbs Motif Sampler | A motif finder and analysis tool | Gibbs |
| GLAM2 Algorithm | Part of a motif discovery tool that can detect conserved motifs in a set of DNA or protein sequences. | GLAM2 |
| GoMiner | Ascribe biological significance to large lists of genes by annotating them with their corresponding GO categories | GoMiner |
| InterPro | A comprehensive protein signature resource | The InterPro Database |
| MDscan | Motif Discovery scan for nucleotide and protein motifs | MDscan |
| Melina II | A Web-Based Tool for Promoter Analysis | Melina II |
| MEME Algorithm | Multiple Expectation Maximum for Motif Elicitation | MEME |
| MEME Suite | Motif-based sequence analysis tools | MEME |
| Primer3 | Pick primers from a DNA sequence. | Primer3 |
| TOMTOM and GOMO | Motif discovery tool that can detect conserved motifs in a set of DNA or protein sequences that you provide | MEME |
| UCSC Genome Browser: An Introduction | The UCSC Genome Browser Introduction | UCSC Genome Browser |
| UCSC Genome Browser: Custom Tracks and Table Browser | UCSC Genome Browser advanced topics | UCSC Genome Browser |
| UCSC Genome Browser: The Additional Tools | Additional tools at the UCSC Genome Browser | UCSC Genome Browser |
| UniProt | UniProt, Universal Protein Resource | UniProt |
| VBRC | The Viral Bioinformatics Resource Center | VBRC |
| VISTA | Tools for Comparative Genomics | VISTA |